Index

_

_calc_Esps_mu() (factorpol.alphas_training.AlphasTrainer static method)

_update_workers() (in module factorpol.alphas_training)

A

add_force() (in module factorpol.parameterization) add_molecule() (in module factorpol.qm_worker)

AlphaData (class in factorpol.alphas_training), [1] AlphasTrainer (class in factorpol.alphas_training), [1] AlphaWorker (class in factorpol.alphas_training), [1]

B

BccTrainer (class in factorpol.bcc_training)

BondChargeCorrections (class in factorpol.utilities)

C

calc_Esps() (factorpol.charge_training.ChargeTrainer method) calc_Esps_dpol() (factorpol.charge_training.ChargeTrainer method) calc_Esps_mpol() (factorpol.charge_training.ChargeTrainer method) calc_molecular_dipoles() (factorpol.charge_training.ChargeTrainer method) calc_molecular_dipoles_dpol() (factorpol.charge_training.ChargeTrainer method)

calc_rmse() (in module factorpol.utilities) calc_rrms() (in module factorpol.utilities) canonical_ranking() (in module factorpol.utilities) ChargeTrainer (class in factorpol.charge_training) coulomb_scaling() (in module factorpol.utilities)

D

data (factorpol.utilities.BondChargeCorrections property) (factorpol.utilities.Polarizability property)

derive_resp_dpol() (factorpol.charge_training.ChargeTrainer method)

F

factorpol.alphas_training module, [1] factorpol.bcc_training module factorpol.charge_training module factorpol.parameterization module, [1]

factorpol.qm_worker module, [1] factorpol.utilities module, [1] flatten_a_list() (in module factorpol.utilities) forced_symmetry_esp_charges() (factorpol.charge_training.ChargeTrainer method) from_conformer_to_molecule() (in module factorpol.qm_worker)

G

generate_charges() (factorpol.bcc_training.BccTrainer class method)

M

mm_base_esps (factorpol.charge_training.ChargeTrainer property) mm_dpol_esps (factorpol.charge_training.ChargeTrainer property) module factorpol.alphas_training, [1] factorpol.bcc_training factorpol.charge_training factorpol.parameterization, [1] factorpol.qm_worker, [1] factorpol.utilities, [1]

O

optimize() (factorpol.alphas_training.AlphasTrainer method), [1]

optimize_alphas() (in module factorpol.alphas_training) optimize_alphas_fast() (in module factorpol.alphas_training)

P

pair_equivalent() (in module factorpol.utilities) parameterize_molecule() (in module factorpol.parameterization) parameters (factorpol.utilities.BondChargeCorrections property) (factorpol.utilities.Polarizability property)

plain_esp_charges() (factorpol.charge_training.ChargeTrainer method) polar_region (factorpol.charge_training.ChargeTrainer property) Polarizability (class in factorpol.utilities)

Q

QWorker (class in factorpol.qm_worker), [1]

R

rebuild_molecule() (in module factorpol.qm_worker) recharge_collection (factorpol.utilities.BondChargeCorrections property) remote() (in module factorpol.alphas_training.fit_alphas) resp_dpol (factorpol.charge_training.ChargeTrainer property)

respdpol_dipoles (factorpol.charge_training.ChargeTrainer property) retrieve_by_conformation() (in module factorpol.qm_worker) retrieve_by_external_field() (in module factorpol.qm_worker) retrieve_records() (in module factorpol.utilities)

S

session() (factorpol.utilities.StorageHandler method), [1] smiles (factorpol.charge_training.ChargeTrainer property) smirnoff_labels() (in module factorpol.utilities) start() (factorpol.qm_worker.QWorker method), [1] (factorpol.utilities.StorageHandler method), [1]

stop() (factorpol.utilities.StorageHandler method), [1] StorageHandler (class in factorpol.utilities), [1] store() (factorpol.qm_worker.QWorker method), [1]

T

training() (factorpol.bcc_training.BccTrainer method)

W

worker() (factorpol.alphas_training.AlphasTrainer method), [1]